New Publications: June 2023

WHOI Library. Credit: Archives

(Updated: Aug. 10, 2023) — Every month, research from scientists and affiliates is published in academic journals across the globe. In June 2023, 18 new studies were published. -affiliated authors arein bold.

Our list of recent publications is updated weekly here.


June 2023

Ahuja, N., Hwaun, E., Pungor, J. R., Rafiq, R., Nemes, S., Sakmar, T., Vogt, M. A., Grasse, B., Quiroz, J. D., Montague, T. G., Null, R. W., Dallis, D. N., Gavriouchkina, D., Marletaz, F., Abbo, L., Rokhsar, D. S., Niell, C. M., Soltesz, I., Albertin, C. B., & Rosenthal, J. J. C. (2023). Creation of an albino squid line by CRISPR-Cas9 and its application for in vivo functional imaging of neural activity. Current Biology.

Learn More: See-through Squid Lets Scientists Study Cephalopod Nervous System

Arkhipova, I., Yushenova, I., & Rodriguez, F. (2023). Shaping eukaryotic epigenetic systems by horizontal gene transfer. Bioessays. DOI

Baden, T., Briseño, J., Coffing, G., Cohen-Bodénès, S., Courtney, A., Dickerson, D., Dölen, G., Fiorito, G., Gestal, C., Gustafson, T., Heath-Heckman, E., Hua, Q., Imperadore, P., Kimbara, R., Król, M., Lajbner, Z., Lichilín, N., Macchi, F., McCoy, M. J., Nishiguchi, M. K., Nyholm, S. V., Otjacques, E., Perez-Ferrer, P. A., Ponte, G., Pungor, J. R., Rogers, T. F., Rosenthal, J. J. C., Rouressol, L., Rubas, N., Sanchez, G., Santos, C. P., Schultz, D. T., Seuntjens, E., Songco-Casey, J. O., Stewart, I. E., Styfhals, R., Tuanapaya, S., Vijayan, N., Weissenbacher, A., Zifcakova, L., Schulz, G., Weertman, W., Simakov, O., & Albertin, C. (2023). Cephalopod-omics: Emerging Fields and Technologies in Cephalopod Biology. Integrative and Comparative Biology. DOI

Birk, M. A., Liscovitch-Brauer, N., Dominguez, M. J., McNeme, S., Yue, Y., Hoff, J. D., Twersky, I., Verhey, K. J., Sutton, R. B., Eisenberg, E., & Rosenthal, J. J. C. (2023). Temperature-dependent RNA editing in octopus extensively recodes the neural proteome. Cell.

Learn more: Masters of Acclimation: Octopuses Adjust to Cold by Editing their RNA

Eckmann, C. A., Eberle, J. S., Wittmers, F., Wilken, S., Bergauer, K., Poirier, C., Blum, M., Makareviciute-Fichtner, K., Jimenez, V., Bachy, C., Vermeij, M. J. A., & Worden, A. Z. (2023). Eukaryotic algal community composition in tropical environments from solar salterns to the open sea. Frontiers in Marine Science.

Imperadore, P., Jones, K. M., Morgan, J. R., De Sio, F., & Stahnisch, F. W. (2023). Editorial: Regeneration from cells to limbs: past, present, and future. Frontiers in Cell and Developmental Biology.

Itano, M. S., Kumar, A., & Maddox, P. S. (2023). Editorial: Live cell imaging: Cell and developmental research bridging education, optical engineering, industry, software, shared facilities. Frontiers in Cell and Developmental Biology.

Jeffery, W. R., Li, B., Ng, M., Li, L., Gorički, Š., & Ma, L. (2023). Differentially expressed chaperone genes reveal a stress response required for unidirectional regeneration in the basal chordate Ciona. BMC Biology. DOI

Koop-Jakobsen, K., & Dolch, T. (2023). Future climate conditions alter biomass of salt marsh plants in the Wadden Sea. Marine Biodiversity. DOI

Linklater, D., Vailionis, A., Ryu, M., Kamegaki, S., Morikawa, J., Mu, H., Smith, D., Maasoumi, P., Ford, R., Katkus, T., Blamires, S., Kondo, T., Nishijima, Y., Moraru, D., Shribak, M., O’Connor, A., Ivanova, E. P., Ng, S. H., Masuda, H., & Juodkazis, S. (2023). Structure and Optical Anisotropy of Spider Scales and Silk: The Use of Chromaticity and Azimuth Colors to Optically Characterize Complex Biological Structures. Nanomaterials.

Miller, S. E., Colman, A. S., & Waldbauer, J. R. (2023). Metaproteomics reveals functional partitioning and vegetational variation among permafrost-affected Arctic soil bacterial communities. MSystems. DOI

Ruff, S. E., Humez, P., de Angelis, I. H., Diao, M., Nightingale, M., Cho, S., Connors, L., Kuloyo, O. O., Seltzer, A., Bowman, S., Wankel, S. D., McClain, C. N., Mayer, B., & Strous, M. (2023). Hydrogen and dark oxygen drive microbial productivity in diverse groundwater ecosystems. Nature Communications.

Learn more: Life Below Our Feet: Team Discovers Microbes Thriving in Groundwater, Producing Oxygen in the Dark

Strauss, J., Choi, C. J., Grone, J., Wittmers, F., Jimenez, V., Makareviciute-Fichtner, K., Bachy, C., Jaeger, G. S., Poirier, C., Eckmann, C., Spezzano, R., Löscher, C. R., Sarma, V. V. S. S., Mahadevan, A., & Worden, A. Z. (2023). The Bay of Bengal exposes abundant photosynthetic picoplankton and newfound diversity along salinity-driven gradients. Environmental Microbiology. DOI

Torres-Morales, J., Mark Welch, J. L., Dewhirst, F. E., & Borisy, G. G. (2023). Site-specialization of human oral Gemella species. Journal of Oral Microbiology.

Vallecillo-Viejo, I. C., Voss, G., Albertin, C. B., Liscovitch-Brauer, N., Eisenberg, E., & Rosenthal, J. J. C. (2023). Squid express conserved ADAR orthologs that possess novel features. Frontiers in Genome Editing.

Vicente-Rodríguez, L. C., Torres-Arroyo, A. C., Hernández-Vázquez, A., Rosa-Casillas, M., Bracho-Rincón, D. P., de Jesús, P. M., Behra, M. L., Habib, M. R., Zhou, X.-N., Rosenthal, J. J. C., & Miller, M. W. (2023). The FMRF-NH2 gated sodium channel of Biomphalaria glabrata: Localization and expression following infection by Schistosoma mansoni. PLoS Neglected Tropical Diseases.

von Montfort, G. M., Costello, J. H., Colin, S. P., Morandini, A. C., Migotto, A. E., Maronna, M. M., Reginato, M., Miyake, H., & Nagata, R. M. (2023). Ontogenetic transitions, biomechanical trade-offs and macroevolution of scyphozoan medusae swimming patterns. Scientific Reports.

Wilken, S., Yung, C. C. M., Poirier, C., Massana, R., Jimenez, V., & Worden, A. Z. (2023). Choanoflagellates alongside diverse uncultured predatory protists consume the abundant open-ocean cyanobacterium Prochlorococcus. Proceedings of the National Academy of Sciences of the United States of America.

Are you an scientist with a paper that came out this month, which was not included on this list? We apologize for the oversight. Please emailcomm@mbl.edu